The detailed information of tRNA gene sequence


Sequence ID>PL171000977
Genome IDCP013615
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridium perfringens JP838 plasmid:pJFP838A
Start position on genome 375610
End posion on genome 375697
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgcataacat
tRNA gene sequence 
GGAGAGTTGGTAGAGTGGTCGATTACATCAGTCTTGAAAACTGAAGGTGGTAAAACATCC
AAGGGTTCGAATCCCTTACTCTCCTCCA
Downstream region at tRNA end position 
ttttagtaac
Secondary structure (Cloverleaf model)
>PL171000977	Ser	TGA
                   t      TCCA ttttagtaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G A T G       A A G G G     C
    G       + | | |                 T T
    T       T T A C
      C G A        A     AGGTGGTAAAACATCC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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