The detailed information of tRNA gene sequence


Sequence ID>PL171000981
Genome IDCP013615
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridium perfringens JP838 plasmid:pJFP838A
Start position on genome 376523
End posion on genome 376597
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aatattatat
tRNA gene sequence 
GGGAAGTTAGCTTAACTGGAAAAGCATTCGGTTGAAGCCCGAAGGAAGTGAGTTCAAGTC
TTGCACTTCCCACCA
Downstream region at tRNA end position 
aaaacataag
Secondary structure (Cloverleaf model)
>PL171000981	Phe	GAA
                   t      ACCA aaaacataag
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A          T G
                    T     C G T T C     A
      C A A        A      | + + | |     A
    T       T T C G       G T G A G     C
    G       | | | |                 T T
    G       A A G C
      A A          A     GGAA
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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