The detailed information of tRNA gene sequence


Sequence ID>PL171000984
Genome IDCP013615
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridium perfringens JP838 plasmid:pJFP838A
Start position on genome 377806
End posion on genome 377879
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attttaattt
tRNA gene sequence 
GAGGGCGTAGTTAAATGGTATAACAAAGGTCTCCAAAACCTTAATTGGAAGTTCGATTCT
TCTCGCCTTTGCCA
Downstream region at tRNA end position 
aattaaatat
Secondary structure (Cloverleaf model)
>PL171000984	Trp	CCA
                   t      GCCA aattaaatat
                     G + T
                     A - T
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     T C T T C     A
        A A        A      + | | | |     G
      T     A T T G       G G A A G     C
      G     | | | |                 T T
      G     T A A C
        T A        A     AATT
                    A - T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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