The detailed information of tRNA gene sequence


Sequence ID>PL171001022
Genome IDCP015231
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRuegeria mobilis F1926 plasmid:unnamed1
Start position on genome 865970
End posion on genome 865881
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctgcagaacc
tRNA gene sequence 
GGGGAGGTGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTGAACGTGAGAGCGTT
CCCAGGGTTCGAATCCCTGTCTCCCCGCCA
Downstream region at tRNA end position 
ttaaatcaat
Secondary structure (Cloverleaf model)
>PL171001022	Ser	TGA
                   c      GCCA ttaaatcaat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAACGTGAGAGCGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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