The detailed information of tRNA gene sequence


Sequence ID>PL171001039
Genome IDCP015372
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPandoraea pnomenusa MCB032 plasmid:unnamed 1
Start position on genome 44508
End posion on genome 44594
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggcagctttt
tRNA gene sequence 
GGACGGATGGGTGAGAGGCTCAAACCGCCGGACTGTAAATCCGGAGCCCGCAAGGCGTCG
CTGGTTCGAATCCAGCTCTGTCCACAA
Downstream region at tRNA end position 
tgtttctctg
Secondary structure (Cloverleaf model)
>PL171001039	Tyr	GTA
                   t      ACAA tgtttctctg
                     G - C
                     G - C
                     A - T
                     C - G
                     G + T
                     G - C
                     A - T          T A
                    T     C G A C C     A
      A G A        G      | | | | |     G
    G       G T G G       G C T G G     C
    G         | | |                 T T
    C       A A C C
      T C A        G     AGCCCGCAAGGCGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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