The detailed information of tRNA gene sequence


Sequence ID>PL171001040
Genome IDCP015372
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPandoraea pnomenusa MCB032 plasmid:unnamed 1
Start position on genome 44604
End posion on genome 44679
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
atgtttctct
tRNA gene sequence 
GTCGGTATCGTCTAGTGGACTAGGACATCACCCTTTCACGGTGAATACACGGGTTCGAAT
CCCGTTACCGACGCCA
Downstream region at tRNA end position 
gttttctgcg
Secondary structure (Cloverleaf model)
>PL171001040	Glu	TTC
                   t      GCCA gttttctgcg
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    A       G G A C
      C T A        A     ATAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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