The detailed information of tRNA gene sequence


Sequence ID>PL171001177
Genome IDCP015881
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesEnsifer adhaerens Casida A plasmid:pCasidaAA
Start position on genome 1223699
End posion on genome 1223623
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
caaccggaat
tRNA gene sequence 
GGGCCCGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGCAGTTCGAG
TCTGCCCGGGCCCACCA
Downstream region at tRNA end position 
ttctgggatc
Secondary structure (Cloverleaf model)
>PL171001177	Ile	GAT
                   t      ACCA ttctgggatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C C G T C     A
      G G A        A      | | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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