The detailed information of tRNA gene sequence


Sequence ID>PL171001182
Genome IDCP015882
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesEnsifer adhaerens Casida A plasmid:pCasidaAB
Start position on genome 1211168
End posion on genome 1211093
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cggaacggtt
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAGCGGTTCGATC
CCGCTCAGCTCCACCA
Downstream region at tRNA end position 
attcgattgg
Secondary structure (Cloverleaf model)
>PL171001182	Ala	TGC
                   t      ACCA attcgattgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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