The detailed information of tRNA gene sequence


Sequence ID>PL171001290
Genome IDCP017076
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNovosphingobium resinovorum SA1 plasmid:pSA1
Start position on genome 749405
End posion on genome 749496
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agccgcatcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAGCGGTTTGCTAAACCGTCGTGCCCTTAAGGGGG
CACCCCGGGTTCGAATCCCGGCGTCTCCGCCA
Downstream region at tRNA end position 
ccggcttgtc
Secondary structure (Cloverleaf model)
>PL171001290	Ser	GCT
                   c      GCCA ccggcttgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G T G G       C C G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCCCTTAAGGGGGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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