The detailed information of tRNA gene sequence


Sequence ID>PL171001299
Genome IDCP017193
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXanthomonas campestris pv. vesicatoria str. 85-10 plasmid:p_XCV_3
Start position on genome 2479
End posion on genome 2571
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gatcgatcac
tRNA gene sequence 
GCCCCTGTAGCTCAATGGGTAGAGCAGCGGATTTATATCCCGTCAGCGCCAGATAAGCGG
CAAGTGCCGGTTCGAGCCCGGCCAGGGGCACCA
Downstream region at tRNA end position 
ccaccctcag
Secondary structure (Cloverleaf model)
>PL171001299	Ile	TAT
                   c      ACCA ccaccctcag
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          C G
                    T     C G G C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CAGCGCCAGATAAGCGGCAAGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A   C
                  T       T
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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