The detailed information of tRNA gene sequence


Sequence ID>PL171001324
Genome IDCP018025
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAlteromonas mediterranea CP48 plasmid:pAMCP48-600
Start position on genome 396858
End posion on genome 396933
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aactgtttgt
tRNA gene sequence 
AGGGGTGTAGCCAAGTTGGTTAAGGCATCGGACTTTGATTCCGACATCGGGGGTTCAAAT
CCCTCCACCCCCGCCA
Downstream region at tRNA end position 
ttttgctttg
Secondary structure (Cloverleaf model)
>PL171001324	Gln	TTG
                   t      GCCA ttttgctttg
                     A   C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       A C C G       G G G G G     C
    G         | | |                 T T
    G       A G G C
      T T A        A     CATC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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