The detailed information of tRNA gene sequence


Sequence ID>PL171001325
Genome IDCP018025
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAlteromonas mediterranea CP48 plasmid:pAMCP48-600
Start position on genome 397147
End posion on genome 397238
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
acaacgcttc
tRNA gene sequence 
GCCCAGTTAGCTCAGTTGGTAGAGCAGCGGATTTATATCCCGTAGAGCCAGATAAGCTGT
TTGCGCCGGTTCGATTCCGGCACTGGGTACCA
Downstream region at tRNA end position 
aaccttctaa
Secondary structure (Cloverleaf model)
>PL171001325	Ile	TAT
                   c      ACCA aaccttctaa
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A          T T
                    T     C G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGAGCCAGATAAGCTGTTTGC
                    G + T
                    C - G
                    G - C
                    G - C
                    A   C
                  T       T
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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