The detailed information of tRNA gene sequence


Sequence ID>PL171001326
Genome IDCP018025
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAlteromonas mediterranea CP48 plasmid:pAMCP48-600
Start position on genome 404168
End posion on genome 404256
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaacaaatat
tRNA gene sequence 
GGAGAGGTGGCGGAGTGGCTTAACGCAACTGCCTGGAAAGCAGTGGTCCTGAGTGGGACT
CGAGGGTTCGAATCCCTCCCTCTTCGCCA
Downstream region at tRNA end position 
ttccgcctaa
Secondary structure (Cloverleaf model)
>PL171001326	Ser	GGA
                   t      GCCA ttccgcctaa
                     G - C
                     G + T
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C G       G A G G G     C
    G         | | |                 T T
    C       A C G C
      T T A        A     GGTCCTGAGTGGGACTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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