The detailed information of tRNA gene sequence


Sequence ID>PL171001327
Genome IDCP018028
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAlteromonas mediterranea CP49 plasmid:MCP49-600
Start position on genome 334163
End posion on genome 334239
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tccaatttat
tRNA gene sequence 
GGGGACATAGCTCTAATTGGTAGAGCAGCGGATTCCAAATCCGACGGTTGGGGGTTCGAA
TCCCTCTGGCCCCGCCA
Downstream region at tRNA end position 
tattgaaacg
Secondary structure (Cloverleaf model)
>PL171001327	Trp	CCA
                   t      GCCA tattgaaacg
                     G - C
                     G - C
                     G - C
                     G - C
                     A   G
                     C - G
                     A - T          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     CGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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