The detailed information of tRNA gene sequence


Sequence ID>PL171001339
Genome IDCP018326
Search identical group
Phylum/ClassFirmicutes
SpeciesLactobacillus plantarum subsp. plantarum TS12 plasmid:pLP12-2
Start position on genome 15595
End posion on genome 15666
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgtctattaa
tRNA gene sequence 
GCAAATATGATCTAATTGGCAAGATGGCGGTCTCCAAAACCGTCTATGTTGGTTCAAATC
CAGCTATCTGTGtag
Downstream region at tRNA end position 
ccagcggatt
Secondary structure (Cloverleaf model)
>PL171001339	Trp	CCA
                   a      Gtag ccagcggatt
                     G + T
                     C - G
                     A - T
                     A   C
                     A - T
                     T - A
                     A - T          T A
                    T     C G A C C     A
      T A A        G      | + | | |     A
    T       T C T A       G T T G G     C
    G       | | | |                 T T
    G       A G A T
      C A          G     CTAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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