The detailed information of tRNA gene sequence


Sequence ID>PL171001412
Genome IDCP020032
Search identical group
Phylum/ClassFirmicutes
SpeciesGeobacillus thermodenitrificans T12 plasmid:pGeo12b
Start position on genome 32376
End posion on genome 32446
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taacggttat
tRNA gene sequence 
GGTGGTATAGCCAAGTGGTAAGGCAAAGGTCTGCAAAACCTTGACCCTCGGTTCGAATCC
GGGTACCACCTtta
Downstream region at tRNA end position 
tcctccttta
Secondary structure (Cloverleaf model)
>PL171001412	Cys	GCA
                   t      Ttta tcctccttta
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     G G G C C     A
        G A        A      | + | | |     G
      T     A C C G       C T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GACC
                    A - T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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