The detailed information of tRNA gene sequence


Sequence ID>PL171001417
Genome IDCP020043
Search identical group
Phylum/ClassActinobacteria
SpeciesStreptomyces katrae S3 plasmid:pS3-4_1
Start position on genome 171690
End posion on genome 171775
Amino Acid Pseudo
Anticodon CTT
Upstream region at tRNA start position 
aaaggccgat
tRNA gene sequence 
GGAGAGGTACCCAAAGCGGCCGAATGGGGTCCGGCTCTTCGCCGGACGGGCTCTGCCCAC
GCAGGTTCGAATCCTGCCCTCTCCGCag
Downstream region at tRNA end position 
gtgctcatcc
Secondary structure (Cloverleaf model)
>PL171001417	Pseudo	CTT
                   t      GCag gtgctcatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G T C C     A
    C G A A        A      | | | | |     G
  G         A C C C       G C A G G     C
  G         | | | |                 T T
  C         T G G G
    C G A A        G     CGGGCTCTGCCCAC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       G
                  T       C
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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