The detailed information of tRNA gene sequence


Sequence ID>PL171001449
Genome IDCP020460
Search identical group
Phylum/ClassFirmicutes
SpeciesLactobacillus sakei FAM18311 plasmid:pFAM18311_1
Start position on genome 18640
End posion on genome 18711
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttagattatg
tRNA gene sequence 
TACTCGTTGGTCAAGTGGTTAAGACGCTGTTCTTTCAAGACAGAAGCATAGGTTCAATTC
CTATACGAGTAAttc
Downstream region at tRNA end position 
aagactagtt
Secondary structure (Cloverleaf model)
>PL171001449	Glu	TTC
                   g      Attc aagactagtt
                     T - A
                     A - T
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     T A T C C     A
      T G A        G      | | | | |     A
    G       A C T G       A T A G G     C
    G         | | |                 T T
    T       A G A C
      T A          G     AAGC
                    C - G
                    T - A
                    G - C
                    T - A
                    T + G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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