The detailed information of tRNA gene sequence


Sequence ID>PL171001493
Genome IDCP021537
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli AR_0149 plasmid:unitig_3
Start position on genome 1960
End posion on genome 2035
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acagtaatct
tRNA gene sequence 
GGCCCTTTAGCTCAGTGGTTAGAGCTGGCGACTCATAATCGCACGGTCACCGGTTCAAGT
CCGGTAGGGGCCACCA
Downstream region at tRNA end position 
tatttggttg
Secondary structure (Cloverleaf model)
>PL171001493	Met	CAT
                   t      ACCA tatttggttg
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T - A          T G
                    T     T G G C C     A
      T G A        A      | | | | |     A
    G       C T C G       A C C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     CGGTC
                    G   A
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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