The detailed information of tRNA gene sequence


Sequence ID>PL171001503
Genome IDCP021798
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSinorhizobium meliloti USDA1106 plasmid:psymA
Start position on genome 708322
End posion on genome 708227
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttcaacgcct
tRNA gene sequence 
GGAAGAGAATCATGCCCGGTGGCATGTCCGGACTTCAAATCCGGGTGGGGCAGCGAGGCT
GCCTTGGGTGGGTTCGACTCCCATTCTCTTCCGCCA
Downstream region at tRNA end position 
tcaggagacc
Secondary structure (Cloverleaf model)
>PL171001503	SeC(p)	TCA
                   t      GCCA tcaggagacc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       G T A C       G T G G G     C
    G       | | | |                 T T
    T       C A T G
      G G          T     GTGGGGCAGCGAGGCTGCCTTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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