The detailed information of tRNA gene sequence


Sequence ID>PL171001649
Genome IDCP022308
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAlcanivorax sp. N3-7A plasmid:unnamed1
Start position on genome 204953
End posion on genome 204877
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acccgctcat
tRNA gene sequence 
GGGCCTATAGCTCAATTGGTTAGAGCAGCGGACTCATAATCCGTTGGTTCCAGGTTCAAG
TCCTGGTGGGCCCACCA
Downstream region at tRNA end position 
ctctttcctc
Secondary structure (Cloverleaf model)
>PL171001649	Met	CAT
                   t      ACCA ctctttcctc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T A A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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