The detailed information of tRNA gene sequence


Sequence ID>PL171001660
Genome IDCP022554
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus MAVP-R plasmid:p1
Start position on genome 5527
End posion on genome 5603
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttaaacatct
tRNA gene sequence 
CGGTGAATAGCGCAGCTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGGGTTCGAA
TCCCTCTTCACCGACCA
Downstream region at tRNA end position 
ctttcaaaga
Secondary structure (Cloverleaf model)
>PL171001660	Pro	TGG
                   t      ACCA ctttcaaaga
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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