The detailed information of tRNA gene sequence


Sequence ID>PL171001675
Genome IDCP022567
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhizobium leguminosarum bv. viciae BIHB 1148 plasmid:pSK03
Start position on genome 106695
End posion on genome 106770
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccgacgcca
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCCGGCGGCTCATAACCGCTTGGTTGGGGGTTCGAGT
CCCTCCGGGCCCACCA
Downstream region at tRNA end position 
tttttccagt
Secondary structure (Cloverleaf model)
>PL171001675	Met	CAT
                   a      ACCA tttttccagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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