The detailed information of tRNA gene sequence


Sequence ID>PL171001687
Genome IDCP023072
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSinorhizobium fredii CCBAU 83666 plasmid:pSF83666a
Start position on genome 541828
End posion on genome 541753
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctggaggag
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCCGTCGGCTCATAACCGATTGGTTGCAGGTTCGAGT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
aatttttttg
Secondary structure (Cloverleaf model)
>PL171001687	Met	CAT
                   g      ACCA aatttttttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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