The detailed information of tRNA gene sequence


Sequence ID>PL171001689
Genome IDCP023368
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli 1428 plasmid:p48
Start position on genome 18510
End posion on genome 18585
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatcaaatat
tRNA gene sequence 
GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCACGGTCATCGGTTCAAAT
CCGGTAGGGGCCACCA
Downstream region at tRNA end position 
attcactctc
Secondary structure (Cloverleaf model)
>PL171001689	Met	CAT
                   t      ACCA attcactctc
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T G G C C     A
      T G A        A      | + | | |     A
    G       C T C G       A T C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     CGGTC
                    G   A
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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