The detailed information of tRNA gene sequence


Sequence ID>PL171001707
Genome IDFN668943
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridioides difficile BI1 plasmid:
Start position on genome 40566
End posion on genome 40640
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gagttatttt
tRNA gene sequence 
CGGGATATAGCCAGGTGGTAAGGCGGAGCATTTGGGGTGCTCAGGTCATAGGTTCGAATC
CTATTATTCCGACTA
Downstream region at tRNA end position 
aaaagggagg
Secondary structure (Cloverleaf model)
>PL171001707	Pro	TGG
                   t      ACTA aaaagggagg
                     C - G
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A
                     A - T          T A
                    T     T A T C C     A
        G G        A      | | | | |     G
      T     A C C G       A T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     AGGTC
                    G - C
                    A - T
                    G - C
                    C - G
                    A - T
                  T       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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