The detailed information of tRNA gene sequence


Sequence ID>PL171001708
Genome IDFN668943
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridioides difficile BI1 plasmid:
Start position on genome 41433
End posion on genome 41507
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atagcattaT
tRNA gene sequence 
AGCAGGATAATGCAAATGGTAGCAAATTTGGCTCATTACCAAAAAGTTGAGGGTTCGAAT
CCCTCTCCTGCAATga
Downstream region at tRNA end position 
agaagatagc
Secondary structure (Cloverleaf model)
>PL171001708	Met	CAT
                   T      ATga agaagatagc
                     A   A
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A A A        A      | | | | |     G
    T       C G T A       G A G G G     C
    G       | | |                   T T
    G       G C A A
      T A          A     AAGTT
                    T - A
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       T
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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