The detailed information of tRNA gene sequence


Sequence ID>PL171001720
Genome IDFQ311869
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAzospirillum lipoferum 4B plasmid:AZO_p1
Start position on genome 1038489
End posion on genome 1038413
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gacagacatc
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
acgatgcttg
Secondary structure (Cloverleaf model)
>PL171001720	Met	CAT
                   c      ACCA acgatgcttg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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