The detailed information of tRNA gene sequence


Sequence ID>PL171001760
Genome IDHE577328
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAzospirillum brasilense Sp245 sp245 plasmid:AZOBR_p1
Start position on genome 1397194
End posion on genome 1397287
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgacccggta
tRNA gene sequence 
GGAGGGGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAACCGTTATAGGGGCTCAAACC
CCTATCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
ttcctttcaa
Secondary structure (Cloverleaf model)
>PL171001760	Ser	GCT
                   a      GCCA ttcctttcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      A G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGGCTCAAACCCCTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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