The detailed information of tRNA gene sequence


Sequence ID>PL171001806
Genome IDLN868939
Search identical group
Phylum/ClassActinobacteria
SpeciesNocardia farcinica NCTC11134 plasmid:2
Start position on genome 1318941
End posion on genome 1319018
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accgcgcaaT
tRNA gene sequence 
GGCGGTGTAGCTCAGGCGGTAGAGCAAACGACTCATAATCGTTGTGTCGCCGGTTCGAGT
CCGGCCATCGCTACCC
Downstream region at tRNA end position 
Atactgatta
Secondary structure (Cloverleaf model)
>PL171001806	Met	CAT
                   T      ACCC Atactgatta
                     G + T
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A
                     G - C          T G
                    T     C G G C C     A
      G G A        A      | | | | |     G
    C       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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