The detailed information of tRNA gene sequence


Sequence ID>PL172000004
Genome IDAP018275
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix sp. NIES-4101 plasmid:plasmid2
Start position on genome 12306
End posion on genome 12390
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acccctaaat
tRNA gene sequence 
GGAAGATGCTGCTCAAGGGAGGGCAACTAGTCTTGAAAACTAGAGCAGGGTAATACCTGG
GAGTTCAATTCTTCCATCTTCCGCCt
Downstream region at tRNA end position 
tccacctgaa
Secondary structure (Cloverleaf model)
>PL172000004	Ser	TGA
                   t      GCCt tccacctgaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T T
                    G     C C T T C     A
      A A C        C      | | + | |     A
    G       T C G T       G G G A G     C
    G       + | | |                 T T
    G       G G C A
      A G          A     AGCAGGGTAATACCT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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