The detailed information of tRNA gene sequence


Sequence ID>PL173000054
Genome IDCP001511
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylobacterium extorquens AM1 plasmid:megaplasmid
Start position on genome 1013193
End posion on genome 1013282
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcgccggac
tRNA gene sequence 
GGAGAGGTGGCAGAGCGTTTGAATGCACTGCACTCGAAATGCAGCATGCCCGCAACGGCA
TCGGGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
cctatgcacg
Secondary structure (Cloverleaf model)
>PL173000054	Ser	CGA
                   c      GCCA cctatgcacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G   G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    T         | | |                 T T
    T       A T G C
      T G A        A     CATGCCCGCAACGGCATC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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