The detailed information of tRNA gene sequence


Sequence ID>PL173000208
Genome IDLT604075
Search identical group
Phylum/ClassFirmicutes
SpeciesLactobacillus salivarius plasmid:II
Start position on genome 161666
End posion on genome 161573
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
catgttaaaC
tRNA gene sequence 
GGGAATGGATGGGTTCTGGTGTTCCCTCTGGTCTTCAAAACCAGTATGAGGAGTTAAGAG
CTTCTTGGGTAGGTTCGATTCCTACACTTTCCCgcc
Downstream region at tRNA end position 
atatagataa
Secondary structure (Cloverleaf model)
>PL173000208	SeC(p)	TCA
                   C      Cgcc atatagataa
                     G - C
                     G - C
                     G + T
                     A - T
                     A - T
                     T   C
                     G   A          T T
                    G     C A T C C     A
      C T T        A      | | | | |     G
    T       G G G T       G T A G G     C
    G       + | |                   T T
    G       T C C C
      T G T        T     TATGAGGAGTTAAGAGCTTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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