The detailed information of tRNA gene sequence


Sequence ID>PL173000163
Genome IDCP017759
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCupriavidus sp. NH9 plasmid:pENH92
Start position on genome 320038
End posion on genome 320116
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccttccaatt
tRNA gene sequence 
GGGCCACTAGCTCATGCTTCGTTAAAGCAGCGGACTCATAATCCGTTGGTGCCGTGGTCG
ACTCACGGGAGGCCCACCA
Downstream region at tRNA end position 
cacaaccact
Secondary structure (Cloverleaf model)
>PL173000163	Met	CAT
                   t      ACCA cacaaccact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A   A
                     C - G          T C
                    T     G G C A C     A
    C G T A        A      | | | | |     G
  T         C T C G       C C G T G     C
  T           | | |                 G T
  C         A A G C
    G T T A        A     TGGTG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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