The detailed information of tRNA gene sequence


Sequence ID>PL174000001
Genome IDAP018275
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix sp. NIES-4101 plasmid:plasmid2
Start position on genome 12224
End posion on genome 12301
Amino Acid Pseudo
Anticodon GTG
Upstream region at tRNA start position 
tccactgatg
tRNA gene sequence 
GTGTTTGAAGCCAAAGCGGTCGCGGCGCTGGTTTGTGGAACCAGTCATTAGGGAGTTCAA
GCCTCCTCAGACACCCCT
Downstream region at tRNA end position 
aaatggaaga
Secondary structure (Cloverleaf model)
>PL174000001	Pseudo	GTG
                   g      CCCT aaatggaaga
                     G - C
                     T - A
                     G - C
                     T - A
                     T + G
                     T - A
                     G - C          C G
                    A     T C C T C     A
      G A A        A      + | | | |     A
    C       A C C G       G G G A G     C
    G         | | |                 T T
    G       C G G C
      T C G        G     TCATTA
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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