The detailed information of tRNA gene sequence


Sequence ID>A171000014
Genome IDAM774415
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobacterium salinarum R1 DSM 671 [AM774415]
Start position on genome 1401930
End posion on genome 1402004
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgaagtgcgc
tRNA gene sequence 
GGGTCAGTAGCTCAACTAGGTAGAGCGCCACTCTGATAAGGTGGAGGCTTGCGGTTCAAA
TCCGCACTGACCCACta
Downstream region at tRNA end position 
gcggttcgcg
Secondary structure (Cloverleaf model)
>A171000014	Ile	GAT
                   c      ACta gcggttcgcg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     A C G C C     A
      C A A        A      | | | | |     A
    T       C T C G       T G C G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AGGCT
                    C - G
                    C - G
                    A - T
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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