The detailed information of tRNA gene sequence


Sequence ID>A171000029
Genome IDAM774415
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobacterium salinarum R1 DSM 671 [AM774415]
Start position on genome 1147215
End posion on genome 1147141
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
actactgtcc
tRNA gene sequence 
GGGTCGGTGGTCTAGTCCGGTTATGACGGCTCCTTCACACGGAGCAGGTCGGCGGTTCAA
CTCCGCCCCGACCCAtta
Downstream region at tRNA end position 
cttcgctgcg
Secondary structure (Cloverleaf model)
>A171000029	Val	CAC
                   c      Atta cttcgctgcg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C          T C
                    T     C C G C C     A
    C T G A        G      | | | | |     A
  C         T C T G       G G C G G     C
  G           | | |                 T T
  G         T G A C
    T T A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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