The detailed information of tRNA gene sequence


Sequence ID>A171000058
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 1500698
End posion on genome 1500771
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aatgaaaagc
tRNA gene sequence 
GCAGGGATGGCAGAGCGGCTAATGCGGCAGACTGCAGATCTGTTTTTTGGGAGTTCAACT
CTCCCTCCCTGCACtc
Downstream region at tRNA end position 
attgaggtgg
Secondary structure (Cloverleaf model)
>A171000058	Cys	GCA
                   c      ACtc attgaggtgg
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     C C C T C     A
      C G A        G      | | | | |     A
    G       G A C G       G G G A G     C
    G         | | |                 T T
    C       A T G C
      T A          G     TTTTT
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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