The detailed information of tRNA gene sequence


Sequence ID>A171000065
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 2279365
End posion on genome 2279439
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aatctacgcc
tRNA gene sequence 
GGGCCTGTGGTCTAGTCGGCTATGACGTCGCCTTCACACGGCGGAGGTCAGGGGTTCGAA
TCCCTTCGGGCCCACtc
Downstream region at tRNA end position 
tgtttttttc
Secondary structure (Cloverleaf model)
>A171000065	Val	CAC
                   c      ACtc tgtttttttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | + | | |     G
    C       T C T G       A G G G G     C
    G         | | |                 T T
    G       T G A C
      C T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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