The detailed information of tRNA gene sequence


Sequence ID>A171000074
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 1916692
End posion on genome 1916620
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
tgcaaaactc
tRNA gene sequence 
GCCAACGTGGCAGAGCGGCCATGCAATTGCCTGCAGAGCAATCCTAATCCGGTTCGACTC
CGGACGTTGGCTCtc
Downstream region at tRNA end position 
attttttctt
Secondary structure (Cloverleaf model)
>A171000074	Pseudo	GCA
                   c      TCtc attttttctt
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     C - G
                     G - C          T C
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G A C G       T C C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     CCTAA
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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