The detailed information of tRNA gene sequence


Sequence ID>A171000075
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 1899494
End posion on genome 1899408
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagcatacgt
tRNA gene sequence 
GCTGAGGTAGCCAAGCGGACCACGGCGGCAGCCTTGAGAGCTGTTGAGGCTCACGCCTCG
CGGGAGTTCAAATCTCTCCCTCAGCGCtt
Downstream region at tRNA end position 
acgttttatt
Secondary structure (Cloverleaf model)
>A171000075	Ser	TGA
                   t      GCtt acgttttatt
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     A
    G       A C C G       G G G A G     C
    G         | | |                 T T
    A       C G G C
      C C A        G     TGAGGCTCACGCCTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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