The detailed information of tRNA gene sequence


Sequence ID>A171000101
Genome IDAP011952
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermobacter sp. CaT2 [AP011952]
Start position on genome 1163965
End posion on genome 1164040
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aaaggaaacg
tRNA gene sequence 
GGGCCCGTAGCCTAGCCAGGATAGGGCATCAGACTCCTAATCTGAAGGTCCCGGGTTCAA
ATCCCGGCGGGTCCGCtc
Downstream region at tRNA end position 
aatattctaa
Secondary structure (Cloverleaf model)
>A171000101	Arg	CCT
                   g      GCtc aatattctaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  A         T C C G       C C G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          A     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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