The detailed information of tRNA gene sequence


Sequence ID>A171000107
Genome IDAP011952
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermobacter sp. CaT2 [AP011952]
Start position on genome 1550087
End posion on genome 1550159
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgttatgatt
tRNA gene sequence 
GCCTTAGTGGCTCAGGTGGTAGAGCGATGCCTTGGTAAGGCATAGGTCGGGGGTTCGAAT
CCCCCCTAAGGCTttt
Downstream region at tRNA end position 
ctactgattt
Secondary structure (Cloverleaf model)
>A171000107	Thr	GGT
                   t      Tttt ctactgattt
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     A - T
                     G - C          T A
                    T     C C C C C     A
      G G A        G      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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