The detailed information of tRNA gene sequence


Sequence ID>A171000128
Genome IDAP012489
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum camini SY1 = JCM 12091 [AP012489]
Start position on genome 1223559
End posion on genome 1223636
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tggggcccaa
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGTTAGGACGCCGCCCTGACGCGGCGGAGGTCCGGGGTTCAA
ATCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
aaactccacc
Secondary structure (Cloverleaf model)
>A171000128	Val	GAC
                   a      ACCA aaactccacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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