The detailed information of tRNA gene sequence


Sequence ID>A171000143
Genome IDAP012489
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum camini SY1 = JCM 12091 [AP012489]
Start position on genome 825070
End posion on genome 824982
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttggagagc
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGCCCAAGGCGGCGGGCTTGAGACCCGTTGCCCCGCGAGGGGCG
CGCGGGTTCGAATCCCGCCCCCGGCGCCA
Downstream region at tRNA end position 
tcagaacagc
Secondary structure (Cloverleaf model)
>A171000143	Ser	TGA
                   c      GCCA tcagaacagc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TGCCCCGCGAGGGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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