The detailed information of tRNA gene sequence


Sequence ID>A171000146
Genome IDAP012489
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum camini SY1 = JCM 12091 [AP012489]
Start position on genome 466125
End posion on genome 466049
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aagcgggcgt
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGCGCCCGGTTGGCATCCGGGAGGCCCCGGGTTCAAA
TCCCGGCCGGTCCACCA
Downstream region at tRNA end position 
cccaccccat
Secondary structure (Cloverleaf model)
>A171000146	Ala	GGC
                   t      ACCA cccaccccat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     AGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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