The detailed information of tRNA gene sequence


Sequence ID>A171000158
Genome IDCP000852
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [CP000852]
Start position on genome 1263127
End posion on genome 1263204
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gggcattaag
tRNA gene sequence 
GCCCCGGTCGTTCAGCCTGGTCTAGGATGCGGGCCTGTCGAGCCCGAGACCCGGGTTCGA
ATCCCGGCCGGGGCGCCA
Downstream region at tRNA end position 
aggatacaac
Secondary structure (Cloverleaf model)
>A171000158	Asp	GTC
                   g      GCCA aggatacaac
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     G
  T         C T T G       C C G G G     C
  G         | + | +                 T T
  G         G G A T
    T C T A        G     AGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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