The detailed information of tRNA gene sequence


Sequence ID>A171000159
Genome IDCP000852
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [CP000852]
Start position on genome 1356598
End posion on genome 1356683
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gacaatatag
tRNA gene sequence 
GCCGGGGTGGCCGAGCTTGGTCCAAGGCGCGGGACTGGAGATCCCGTCCCCGCAAGGGGG
CCCGGGTTCAAATCCCGGCCCCGGCAtca
Downstream region at tRNA end position 
tgtttaggtc
Secondary structure (Cloverleaf model)
>A171000159	Ser	GGA
                   g      Atca tgtttaggtc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    T C G A        G      | | | | |     A
  T         G C C G       C C G G G     C
  G           | | |                 T T
  G         A G G C
    T C C A        G     TCCCCGCAAGGGGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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