The detailed information of tRNA gene sequence


Sequence ID>A171000172
Genome IDCP000852
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [CP000852]
Start position on genome 1088754
End posion on genome 1088667
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
aagcccagcg
tRNA gene sequence 
GCGGGGGTGCCCGAGCTTGGTCAAAGGGGGCGGGTTGAGGTCCCGTTGGCGTAGGCCTGC
GTGGGTTCAAATCCCACCCCCCGCACCA
Downstream region at tRNA end position 
ttgccttcat
Secondary structure (Cloverleaf model)
>A171000172	Leu	GAG
                   g      ACCA ttgccttcat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     A
  T         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGCGTAGGCCTGC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.-

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