The detailed information of tRNA gene sequence


Sequence ID>A171000174
Genome IDCP000852
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldivirga maquilingensis IC-167 [CP000852]
Start position on genome 802387
End posion on genome 802311
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgttaactaa
tRNA gene sequence 
GCCCCGGTAGCTCAGCACGGTAGAGCGGCGGGCTGCAGACCCGTAGGCCCCGGGTTCAAA
TCCCGGCCGGGGCTCCA
Downstream region at tRNA end position 
gggatactta
Secondary structure (Cloverleaf model)
>A171000174	Cys	GCA
                   a      TCCA gggatactta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    A       C T C G       C C G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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